Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949582.1_cds_XP_016490395.1_80820
CDS Infomation

[gene=LOC107810172] [db_xref=GeneID:107810172] [protein=ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like] [protein_id=XP_016490395.1] [location=complement(join(21744..22361,23157..23384,23529..24296,24412..24858,25808..25897))] [gbkey=CDS]
Sequence

ATGAAGAAATATCAACTTATACTCTTTTTGTTATTTGTTGGCTTTGCTTTGTCATCAATA
TTACTTCTGATTTATCTCGAACCGGAGGAGATTAGCTTCCAAGAGTTTAAAAACAAGCTA
CTTGAACCTGGTCTTGTTGATCGAATTGTCGTTGCTAACAAAGATGTAGCCAGAGTTTAT
GTAAGGAGTTCTTCACCTGGTAATAATCAAACTGATGATGACACCGTTCAAGGTCCTACA
AGTGGTACAAATGGTAATAGAAACATTAGCAACCACAAATACTCTTTTAACATTGGGAGT
GTTGAGTCATTTGAGCAGAAGCTGAAGGAAGCACAAGAAGCCTGGGGAATAGACTCTAAT
AATTTTGTCTCTGTGGTATATGTTAATGAGTTGGATTGGTTCCCAGAACTGATGAAGTGT
GGTTTAACCCTGTTGCTTCTAGCTATCCTTTATTATATGGATTTTGGAGGTGCTCGTGGA
ATACTTAATATTGGTAAAGCGCATTTCACAAAGATGGACAAAAATGCAAAGAATAAGGTC
TTCTTCAAGGATGTGGCTGGATGTGACGAGGCTAAGCAAGAAATTATGGACTTCGTCCAC
TTCCTTAAGAATCCCAAAAAATACGAGGAGCTAGGAGCCAAAATTCCTAAGGGTGCTCTT
CTAGTTGGTCCTCCTGGGACTGGAAAGACACTTTTAGCTAAAGCTACAGCTGGAGAAGCT
GGCGTACCTTTTCTCTCGATTTCTGGGTCAGAATTTGTGCAGATGTTTGTTGGTGTTGGT
CCAGCTAGAGTTAGGAGCTTATTTCGGGAGGCAAGACGTTGTGCACCTAGTATAATTTTC
ATCGACGAGATCGATGCAGTAGGTGGAACAAGAGGGAAGGGACGCTATTCTGGAGGAAAC
GATGAACGTGAGGGTACTTTAAACCACCTGCTTGTAGAAATGGACGGATTTGCAACCACA
TCTGGTGTAGTTGTACTCGCTGGCACAAATAGACTTGATATATTAGACAAAGCCTTGTTA
AGGCCTGGTCGTTTTGATCGCCAGATTACCATTGACAAGCCAGACATAAAAGGTCGTGAA
CAGATTTTCAGAATCTATCTGAACAAGTTGAAACTTGACCAGGAGGCAGCGTTCTATTCA
CAGAGGTTTGCTGCTCTAACACCAGGATTTGCTGGAGCAGACATTGCGAATGTTTGTAAT
GAAGCTGCTTTGTTTGCTGCTAGGAGTGAGAGTACCACAATCAAAATGCATCATTTCGAG
GCAGCAATAGACAGGGTGATTGGGGGTCTAGAGAAGAAGAACAAGGTCATAAGCAAACTG
GAAAGGAGGACAATTGCGTATCATGAATCCGGCCATGCTGTTGCTGGTTGGTTCTTGGAA
CATGCAGAACCATTACTTAAAGTGACAATTATTCCTCGTGGAACAGCAGCATTAGGATTT
GCTCAATATGTTCCCAATGAAAATCTTTTAATGACTAAGGAGCAGCTATTTGATATGACA
TGCATGACTCTTGGTGGCCGAGCTGCTGAGCAGGTTTTGATTGGAAAGATCTCAACTGGA
GCTCAAGATGATTTGGAGAAAGTAACCAAGATGACATATGCTCAGGTAGCTGTCTATGGT
TTCAGTGACAAGGTTGGTCTTCTTTCTTTTCCGCAAAGAGATGATACATTTGAGACATCA
AAGCCCTACAGTAGCAAGACTGCAGCAATTATTGACGATGAAGTTAGAGAATGGATCGCC
AAGGCATATGATCGTACCCTACAGCTTATAGAGGAACACAGAGAACATGTAGCTCAGATT
GCAGAATTGCTACTTGAAAAGGAGGTCCTTCATCAAGAAGATCTGGTCCAGGTATTGGGT
GAACGCTCATTTGAGAATAGTGAGCTTACAAACTATAACAGGTTCAAGCAAGGATTCGAA
GAAGAGAACAGAGAAATTAAAGATATCCCTAAGGACAAGACAGCACAAGATAATCAATCC
TCTTCTGAGGGATCAGAGGTTGTCCCAATCAGTGTTGTCAAAGGTGAAAACGCGCGAAAA
GGCATTGAAAAAGACACAAGGTACATCGGGGCTTTAAGTGTAAAGCGCAAATGTGCATTT
AAAGGATGGGTTCTAGTAAAGAAAGGTGCAGTGAAGAAAAAACAATTATAG

Peptide Sequence

PEP ID

XP_016490395.1
PEP Infomation

PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Nicotiana tabacum]
Sequence

MKKYQLILFLLFVGFALSSILLLIYLEPEEISFQEFKNKLLEPGLVDRIVVANKDVARVY
VRSSSPGNNQTDDDTVQGPTSGTNGNRNISNHKYSFNIGSVESFEQKLKEAQEAWGIDSN
NFVSVVYVNELDWFPELMKCGLTLLLLAILYYMDFGGARGILNIGKAHFTKMDKNAKNKV
FFKDVAGCDEAKQEIMDFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGEA
GVPFLSISGSEFVQMFVGVGPARVRSLFREARRCAPSIIFIDEIDAVGGTRGKGRYSGGN
DEREGTLNHLLVEMDGFATTSGVVVLAGTNRLDILDKALLRPGRFDRQITIDKPDIKGRE
QIFRIYLNKLKLDQEAAFYSQRFAALTPGFAGADIANVCNEAALFAARSESTTIKMHHFE
AAIDRVIGGLEKKNKVISKLERRTIAYHESGHAVAGWFLEHAEPLLKVTIIPRGTAALGF
AQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQDDLEKVTKMTYAQVAVYG
FSDKVGLLSFPQRDDTFETSKPYSSKTAAIIDDEVREWIAKAYDRTLQLIEEHREHVAQI
AELLLEKEVLHQEDLVQVLGERSFENSELTNYNRFKQGFEEENREIKDIPKDKTAQDNQS
SSEGSEVVPISVVKGENARKGIEKDTRYIGALSVKRKCAFKGWVLVKKGAVKKKQL

Transcript Sequence

Gene sequence data has not been registered.